Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour

Reviewed · COMINO & THE BLUE LAGOON CRUISES

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour

4.9 · 290 reviews 2 hours From $187 Operated by Outdoor Explorers Malta Gozo Comino Boat trips · Bookable on GetYourGuide
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The Blue Lagoon looks different when it is quiet. This private 2-hour boat plan is built for Comino and Malta’s clearest coves, with optional cave and reef stops you can’t reach the same way on big group boats.

I love the practical, vacation-friendly touches: snorkel gear on board and a chilled ice cooler so you can focus on swimming, not logistics. Captains like Ginger and Justin also set the tone fast, with music, stories, and helpful guidance when it comes time to jump in.

One consideration before you book: the price you see does not include the €79 fuel fee, paid in cash on arrival, and weather can sometimes affect the route.

Key things to know before you go

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Key things to know before you go

  • Private charter for up to 6: just you and the captain on the boat, so you control the vibe.
  • Two lagoons plus Cominotto time: Blue Lagoon, Crystal Lagoon, and reef/island stops fit into a tight 2 hours.
  • Swim-and-snorkel setup included: snorkel equipment and a cooler with ice flakes keep things easy.
  • Cave and arch photo stops: Lovers Cave and Popeye Cave are built into the route possibilities.
  • Crowd-avoidance is the whole point: anchoring and swimming away from the busiest shore spots when conditions allow.
  • Captain-led flexibility: you can often choose where you go and how long you stay at stops.

More Comino and Blue Lagoon boat trips we have swum and snorkelled off

Why this private Comino and Blue Lagoon boat feels like the “real” Malta

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Why this private Comino and Blue Lagoon boat feels like the “real” Malta
Malta’s Blue Lagoon and Comino are famous for a reason. But if your only experience is the shore-side scene, you miss the best part: the water. This tour is designed around being in the lagoons on your own schedule, with a captain who can steer you toward clearer water and calmer moments.

The biggest value is how the time is used. Instead of sitting on a ferry with hundreds of people, you’re on a small speedboat that can move quickly between coves. That matters here because conditions change fast—wind, glare, boat traffic—and a good captain can shift your route to keep the day feeling fresh.

Price and real value: $187 per group up to 6

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Price and real value: $187 per group up to 6
The headline price is $187 per group (up to 6 people) for a 2-hour private charter. In many places, “private” costs way more than a standard group tour. Here, the math works better because you’re splitting the charter cost across a small group.

That said, plan for what’s not included:

  • Fuel cost is €79, paid in cash on arrival.
  • Food and drinks are not included.
  • Hotel pickup/drop-off is not included.

When you budget the fuel, the true cost is still reasonable for what you get: a private boat, snorkel equipment, lagoon/marina fees (listed as included), and a skipper who acts as your guide. If you’re traveling as a couple, it can still be a sweet deal compared with multiple tickets on larger boats—especially if your priority is quiet water and easy swimming from the boat.

Meeting at the wooden kiosk and getting out on the water fast

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Meeting at the wooden kiosk and getting out on the water fast
You meet next to the wooden kiosk with umbrellas. It’s described as the only kiosk in the area, so you’re not hunting around for an office sign.

Departure can be from either:

  • Ċirkewwa (Malta), or
  • Gozo.

If you don’t choose a starting point when booking, the default is Ċirkewwa. This is more important than it sounds. Starting from the right side can shave off time and help you aim for the water conditions you want.

First minutes matter on a short tour. People seem to enjoy that the day kicks off quickly—then the captain starts guiding almost immediately, with music and a relaxed safety check before anyone jumps in.

More private Malta boat charters we have taken the helm on

Comino first: the short stop that sets up the rest of your swims

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Comino first: the short stop that sets up the rest of your swims
After you head out, there’s a Comino visit with a quick cruise segment. Even though it is brief, it acts like a warm-up: you get oriented to the coastline, you settle into the boat rhythm, and you start timing your swims for when the water looks best.

What I like about this sequencing is that it prevents that awkward feeling you get on some tours—where you spend half the time traveling and only get a rushed swim later. Here, the plan builds toward the lagoons while keeping the ride fun.

Blue Lagoon swimming and snorkeling time you can actually enjoy

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Blue Lagoon swimming and snorkeling time you can actually enjoy
The main stop is the Blue Lagoon. Expect a mix of:

  • a photo stop,
  • sightseeing,
  • free time,
  • and swimming/snorkeling (with marine life viewing).

The practical advantage of a private speedboat is that you’re not stuck waiting your turn near the busiest shore entrances. One of the most praised parts of this trip is exactly that: getting into the right moments of the day, when the water looks calm and the number of boats isn’t overwhelming.

People have also mentioned timing tricks. For example, starting around 17:00 can make Blue Lagoon feel quieter and more relaxed, with sun and softer light. If you can choose your departure time, it’s worth aiming for a period when you expect the crowd density to be lower and the water to stay swimmable.

Snorkeling gear is included. That matters because it removes the usual friction—no need to rent gear in a hurry, and you can focus on the fun part: floating above clear water and spotting fish around the edges.

A quick reality check

If sea conditions are choppy, swimming from the boat can feel more like a workout than a postcard. That’s not a “bad tour” issue—it’s the Med. Your skipper can often adjust the plan to keep things comfortable.

Crystal Lagoon: a different vibe from the Blue Lagoon

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Crystal Lagoon: a different vibe from the Blue Lagoon
Next comes Crystal Lagoon, another major water area where you get time for sightseeing, snorkeling, and swimming. This stop is often where you notice the difference in scenery: the water stays clear, but the surrounding rock and cliffs feel more dramatic.

The stop pattern usually includes a photo moment and then free time to swim. Because you’re on a small boat, you can usually switch between “look” and “go” without long delays. You also tend to waste less time than you would on a larger tour where everyone needs to line up.

What you should watch for

Crystal Lagoon’s beauty comes with sun glare. Bring sunglasses and protect your skin—especially if you want to snorkel more than once. Also remember your time is limited to 2 hours total, so keep an eye on the clock once you’re in the water.

Cominotto and the reef: where the boat size helps

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Cominotto and the reef: where the boat size helps
You also visit Cominotto and nearby reef areas, with time for cruising and photo moments. This is one of those stops where the private-boat setup pays off.

Big boats often struggle to get close to the best angles for caves, arches, and reef edges. A smaller charter can usually position in a way that makes snorkeling feel more direct—jump in, swim a short section, and enjoy what’s around you without losing all your time to boat traffic.

Cave and arch highlights: Lovers Cave, Popeye Cave, and the cave-photo mindset

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Cave and arch highlights: Lovers Cave, Popeye Cave, and the cave-photo mindset
The route can include stops tied to caves and natural formations such as:

  • Lovers Cave: described as a 40-meter cave with a hidden white sandy beach inside, ideal for photos.
  • Popeye Cave: a natural arch with the look of the Blue Grotto framing effect.
  • Comino Caves and Lantern Point: rock formations described as accessible from the water in a way that works better with private boats.

Even when you are not going fully inside a cave, these stops are valuable because they change the whole feel of the day. Instead of only swimming in lagoons, you get that “coastline meets sea” magic—bright water, dark rock, and photos that actually look like they come from a movie set.

One practical tip: take photos early at each stop. When everyone is ready to swim, the boat positions may shift quickly. If you want clean shots of cave entrances and arches, do it before the group jumps in.

Optional stop ideas: Lantern Point and the P31 wreck (weather permitting)

Malta: Comino, Blue lagoon, Crystal Lagoon Private Boat Tour - Optional stop ideas: Lantern Point and the P31 wreck (weather permitting)
Your day may also include optional extras if conditions allow, like the P31 Wreck stop (weather permitting). This is the kind of add-on that can turn an already-great water day into a more memorable one—especially if you like the idea of maritime history without making it a full-on museum trip.

Because it is weather dependent, don’t build your whole expectations around it. Think of it as a bonus when the sea cooperates.

How the skipper turns a 2-hour trip into a personal experience

This is a captain-led tour, and the names show up repeatedly in the way people describe the day. Guides such as Ginger, Matt, Zlatko, Jimmy, Justin, Pedro, Josef, Casper, Clavion, and Mahmoud are cited for being friendly, flexible, and focused on making the day work for the group.

Here are the “human” things that matter:

  • Some skippers play music and set an easy atmosphere right away (one review mentioned loud music at the start).
  • Several captains take photos and help you get shots from good angles.
  • Many people felt safe because the skipper checks everyone is comfortable swimmers before you head into the water.
  • A few captains go beyond basics—one even swam with people to guide them through a cave.

If you’re someone who likes to talk while you travel, this works well. Your skipper is also your guide, sharing stories about the places you’re seeing.

What to bring (and the small tricks that make snorkeling better)

The tour includes snorkel equipment and a cooler with ice. But you still control your comfort. For this kind of water day, I’d pack:

  • Swimwear plus a light cover-up for the short boat ride between stops.
  • Sunscreen and sunglasses for glare protection.
  • A towel (not listed as included).
  • Water shoes if you want extra stability around entries.
  • A dry bag for your phone and camera.

One fun extra tip that came up: bring white bread if you want to encourage fish near the snorkeling spots. If you do try this, use it sparingly and follow your skipper’s lead—fish can gather fast in clear water.

Some boats may also have extras like Bluetooth speakers or floats, depending on your captain. If those are important to you, you can ask what is available when you message close to departure.

Timing and sea conditions: how to choose the right moment to go

Two hours sounds short—and it is. That’s why timing is so important. People have had great experiences when Blue Lagoon is calmer and less busy, and captains often seem to plan around conditions and crowd flow.

Also, know this upfront: the trip is subject to weather and sea conditions. The skipper may adjust or change the route for safety. That is not a disappointment. It’s part of what keeps a swim day fun instead of stressful.

If you’re prone to seasickness, pick a day when the forecast looks steadier and choose your seat where you feel most stable on the boat.

Who should book this Comino and Blue Lagoon private boat?

This tour fits best if you want:

  • Quiet water and less waiting around
  • Real swim time rather than “look then leave”
  • A small-group vibe with a skipper who guides you one-on-one
  • Cave/arch photo stops without hiking or long transfers

It may be less ideal if you:

  • Only want a fast photo tour and don’t care about swimming
  • Are not comfortable in the water (the skipper will check swimmers)
  • Need hotel pickup/drop-off, since that is not included

If you’re traveling with a group of up to six—friends, a family, or a couple traveling with another couple—this is the sweet spot. The per-person value gets better as the group size fills the boat.

Should you book it?

I’d book it if your priority is time in the lagoons and a smoother, quieter experience than you’ll get at the shore with bigger groups. The included snorkel gear, chilled cooler setup, and small-boat access to caves and reefs add real weight to the price.

I’d skip or at least reassess if you hate unexpected costs—because the €79 fuel fee is a real line item—and if you are traveling on a day with sketchy weather where swimming might be limited.

If you’re flexible, pick a departure time that gives you calmer water and better crowd flow, then let the captain do what you’re paying them to do: get you into the best spots, at the right time, in the clearest sea Malta can offer.

FAQ

How much does this private boat trip cost?

The price is $187 per group for up to 6 people, for a duration of 2 hours.

What’s included, and what extra costs should I expect?

Included are the speedboat tour, guide, lagoon and marina fees, snorkeling gear, an ice cooler with ice flakes, and the national park fee. Not included is fuel cost of €79 (paid in cash on arrival), plus food and drinks and hotel pickup/drop-off.

Where is the meeting point?

You meet next to the wooden kiosk with umbrellas, described as the only kiosk in that area.

Can we start the tour from Malta or Gozo?

Yes. The tour can start from either Malta (Ċirkewwa) or Gozo. If you don’t choose, it assumes departure from Ċirkewwa.

Is the route fixed?

No. The activity is subject to weather and sea conditions, and the skipper may adjust or change the route if needed.

What if I cancel?

You can cancel up to 24 hours in advance for a full refund.